Rathayibacter iranicus NCPPB 2253 = VKM Ac-1602

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Rathayibacter

Description

Rathayibacter iranicus NCPPB 2253, also known as VKM Ac-1602, is a Gram-positive bacterium characterized by its rod-shaped morphology. This species contains a single replicon, which is indicative of its genomic structure. The genomic data is accessible under the accession number QGDV00000000.1, providing a basis for further studies on its genetic composition. The classification of Rathayibacter iranicus within the broader context of microbiology underscores its relevance, particularly in relation to plant health and agricultural ecosystems. As a member of the Rathayibacter genus, it is known to be associated with certain plant diseases, specifically those affecting crops. Understanding the traits of Rathayibacter iranicus can contribute to the development of management practices aimed at mitigating its impact on agricultural productivity. In summary, Rathayibacter iranicus NCPPB 2253 exhibits key traits such as being Gram-positive and rod-shaped, with a single replicon and specific genomic information accessible for research. The ecological implications of this bacterium highlight its potential role in plant pathology, emphasizing the importance of continued research into its biology and interactions with plant hosts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusRathayibacter
SpeciesRathayibacter iranicus
StrainNCPPB 2253 = VKM Ac-1602

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rathayibacter iranicus NCPPB 2253 = VKM Ac-1602 Ga0139025_149,

Gene Summary

Adenine Count

550663 bp

Thymine Count

558932 bp

Guanine Count

1135893 bp

Cytosine Count

1134793 bp

Genome Length

3380746 bp

Protein-coding Genes

3268 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holliday junction dna helicase subunit ruvbB0H03_11644Not AvailablePositive2906139 - 290716136534.3
preprotein translocase subunit yajcB0H03_11645Not AvailablePositive2907250 - 290765414836.8
preprotein translocase subunit secdB0H03_11646Not AvailablePositive2907757 - 290948159852.4
protein translocase subunit secfB0H03_11647Not AvailablePositive2909481 - 291049135565.9
rhodanese-related sulfurtransferaseB0H03_11648Not AvailablePositive2910495 - 291083611833.8
gtp pyrophosphokinaseB0H03_11649Not AvailablePositive2910916 - 291316883608.7
transcriptional regulator with abiei antitoxin domain of type iv toxin-antitoxin systemB0H03_11650Not AvailableNegative2913147 - 291371019729.1
uncharacterized protein duf349B0H03_11651Not AvailableNegative2913787 - 291501045140.7
peptidyl-prolyl cis-trans isomerase b (cyclophilin b)B0H03_11652Not AvailableNegative2915197 - 291600327477.8
putative atpaseB0H03_11653Not AvailablePositive2916144 - 291756250633.1

Displaying genes 2811 – 2820 of 3318 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.