Flavobacterium commune str. PK15

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium commune str. PK15 is a rod-shaped bacterium that features the presence of flagella, which suggests it is motile. With a single replicon, this strain has a streamlined genetic organization, potentially facilitating efficient replication and adaptation to its environment. The strain is cataloged under the accession number NZ_CP017774.1, which provides a reference for its genomic data and serves as a basis for further studies. Flavobacterium species are generally known for their ecological roles in the decomposition of organic matter, particularly in aquatic environments. The motility conferred by flagella may enhance the bacterium’s ability to colonize diverse habitats and access nutrients, contributing to its ecological success. This mobility can be particularly advantageous in environments where nutrient availability fluctuates or in biofilm formation on surfaces. The presence of a single replicon might also indicate a relatively stable genome, which can be beneficial for maintaining essential functions in fluctuating environments. Overall, Flavobacterium commune str. PK15 exemplifies traits that may facilitate its survival and ecological role, particularly in nutrient cycling and decomposition processes within its habitat. Further research could elucidate its specific interactions within microbial communities and its contributions to ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium commune
StrainPK15

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium commune str. PK15
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium commune strain PK15 chromosome, complete genome.

Gene Summary

Adenine Count

1264999 bp

Thymine Count

1262302 bp

Guanine Count

667716 bp

Cytosine Count

656197 bp

Genome Length

3851214 bp

Protein-coding Genes

3153 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBIW12_RS01320Not AvailablePositive338830 - 33983739777.7
cdgsh iron-sulfur domain-containing proteinBIW12_RS01325Not AvailableNegative339951 - 3401758146.79
carbonic anhydraseBIW12_RS01330Not AvailablePositive340427 - 34105323707.6
catalase/peroxidase hpiBIW12_RS01335Not AvailableNegative341138 - 34341183053.0
amp-dependent synthetase/ligaseBIW12_RS01340Not AvailablePositive343752 - 34553067380.0
marr family winged helix-turn-helix transcriptional regulatorBIW12_RS01345Not AvailablePositive345773 - 34625818314.1
3-hydroxyacyl-coa dehydrogenase/enoyl-coa hydratase family proteinBIW12_RS01350Not AvailablePositive346308 - 34869888175.6
acetyl-coa c-acyltransferaseBIW12_RS01355Not AvailablePositive348794 - 34997542292.1
acyl-coa dehydrogenase family proteinBIW12_RS01360Not AvailablePositive350055 - 35186066937.5
duf4251 domain-containing proteinBIW12_RS01365Not AvailableNegative351935 - 35245619742.9

Displaying genes 261 – 270 of 3228 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.