Flavobacterium commune str. PK15

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium commune str. PK15 is a rod-shaped bacterium that features the presence of flagella, which suggests it is motile. With a single replicon, this strain has a streamlined genetic organization, potentially facilitating efficient replication and adaptation to its environment. The strain is cataloged under the accession number NZ_CP017774.1, which provides a reference for its genomic data and serves as a basis for further studies. Flavobacterium species are generally known for their ecological roles in the decomposition of organic matter, particularly in aquatic environments. The motility conferred by flagella may enhance the bacterium’s ability to colonize diverse habitats and access nutrients, contributing to its ecological success. This mobility can be particularly advantageous in environments where nutrient availability fluctuates or in biofilm formation on surfaces. The presence of a single replicon might also indicate a relatively stable genome, which can be beneficial for maintaining essential functions in fluctuating environments. Overall, Flavobacterium commune str. PK15 exemplifies traits that may facilitate its survival and ecological role, particularly in nutrient cycling and decomposition processes within its habitat. Further research could elucidate its specific interactions within microbial communities and its contributions to ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium commune
StrainPK15

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium commune str. PK15
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium commune strain PK15 chromosome, complete genome.

Gene Summary

Adenine Count

1264999 bp

Thymine Count

1262302 bp

Guanine Count

667716 bp

Cytosine Count

656197 bp

Genome Length

3851214 bp

Protein-coding Genes

3153 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
t9ss type b sorting domain-containing proteinBIW12_RS09060Not AvailableNegative2161653 - 2164841115858.0
rna methyltransferaseBIW12_RS09065Not AvailableNegative2164874 - 216541019905.0
duf1573 domain-containing proteinBIW12_RS09070Not AvailableNegative2165496 - 216593915526.0
dna mismatch repair protein mutsBIW12_RS09075Not AvailablePositive2166104 - 216871098011.3
Trna-glyNot AvailableNot AvailablePositive2168862 - 2168934Not Available
Trna-leuNot AvailableNot AvailablePositive2168949 - 2169034Not Available
tyrosine-type recombinase/integraseBIW12_RS09090Not AvailablePositive2169088 - 217038350498.1
hypothetical proteinBIW12_RS09095Not AvailablePositive2170422 - 217071811907.3
hypothetical proteinBIW12_RS16440Not AvailableNegative2170826 - 21709965945.65
hypothetical proteinBIW12_RS09100Not AvailableNegative2171030 - 21712789344.45

Displaying genes 1811 – 1820 of 3228 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.