Flavobacterium sp. S87F.05.LMB.W.Kidney.N

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium sp. S87F.05.LMB.W.Kidney.N is a rod-shaped bacterium characterized by the presence of flagella, which suggests it is motile. The organism has a single replicon, indicating a streamlined genetic structure that may facilitate its adaptability and efficiency in various environments. Its accession number is SODX00000000.1, which provides a reference for genetic and genomic studies. Members of the Flavobacterium genus are typically found in aquatic environments and are known for their role in the degradation of organic matter. The motility conferred by the flagella may enhance the bacterium's ability to navigate its habitat, potentially allowing it to exploit nutrient sources more effectively. This trait can also contribute to its ecological interactions, such as colonization patterns and competition with other microorganisms. In summary, Flavobacterium sp. S87F.05.LMB.W.Kidney.N exhibits notable characteristics, including its rod shape, motility through flagella, and a single replicon. These features underline its potential ecological roles, particularly in nutrient cycling within aquatic ecosystems. Understanding such traits can provide insights into the bacterium's functional contributions to its environment, particularly in the context of organic matter decomposition and microbial community dynamics.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium sp. S87F.05.LMB.W.Kidney.N
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium sp. S87F.05.LMB.W.Kidney.N
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium sp. S87F.05.LMB.W.Kidney.N Ga0255691_111, whole

Gene Summary

Adenine Count

1630754 bp

Thymine Count

1648088 bp

Guanine Count

841709 bp

Cytosine Count

804687 bp

Genome Length

4926114 bp

Protein-coding Genes

4170 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gnt-i system high-affinity gluconate transporterEDB96_4044Not AvailablePositive4590868 - 459218747368.2
enamine deaminase rida (yjgf/yer057c/uk114 family)EDB96_4045Not AvailablePositive4592192 - 459265916830.5
d-serine deaminase-like pyridoxal phosphate-dependent proteinEDB96_4046Not AvailablePositive4592698 - 459378941432.5
membrane dipeptidaseEDB96_4047Not AvailablePositive4593802 - 459487240237.7
deor family transcriptional regulatorEDB96_4048Not AvailableNegative4594869 - 459564528354.3
hexosaminidaseEDB96_4049Not AvailablePositive4595804 - 459809587494.7
hypothetical proteinEDB96_4050Not AvailableNegative4598183 - 460061589163.4
succinate dehydrogenase / fumarate reductase iron-sulfur subunitEDB96_4051Not AvailableNegative4600921 - 460166727150.6
succinate dehydrogenase subunit aEDB96_4052Not AvailableNegative4601720 - 460372073667.4
succinate dehydrogenase / fumarate reductase cytochrome b subunitEDB96_4053Not AvailableNegative4603732 - 460439724922.6

Displaying genes 4001 – 4010 of 4279 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.