Rhodococcus ruber BKS 20-38

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus ruber BKS 20-38 is a Gram-positive bacterium characterized by the presence of flagella, which suggests motility. This species has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. Its genetic information can be accessed through the accession number AOEX00000000.1. The Gram-positive nature of Rhodococcus ruber BKS 20-38 suggests a thick peptidoglycan layer in its cell wall, which is a common characteristic among this group of bacteria. This structural feature can contribute to its resilience in various environments, making it a candidate for diverse ecological roles. Rhodococcus species, including R. ruber, are known for their metabolic versatility, particularly in the degradation of organic compounds. This metabolic capability allows them to thrive in environments contaminated with pollutants, including hydrocarbons and other organic solvents. As such, Rhodococcus ruber BKS 20-38 may play an important role in bioremediation processes, where microorganisms are utilized to clean up contaminated sites. In summary, the combination of its Gram-positive nature, flagellar motility, and genetic characteristics positions Rhodococcus ruber BKS 20-38 as a significant organism in both ecological contexts and potential applications in environmental biotechnology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus ruber
StrainBKS 20-38

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus ruber BKS 20-38 Contig00108, whole genome shotgun

Gene Summary

Adenine Count

930589 bp

Thymine Count

924719 bp

Guanine Count

2127947 bp

Cytosine Count

2143609 bp

Genome Length

6126900 bp

Protein-coding Genes

5511 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidoglycan glycosyltransferaseG352_00362Not AvailablePositive75441 - 7728864923.3
udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligaseG352_00367Not AvailablePositive77517 - 7910954235.3
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseG352_00372Not AvailablePositive79106 - 8063251685.6
phospho-n-acetylmuramoyl-pentapeptide- transferaseG352_00377Not AvailablePositive80629 - 8171137921.7
udp-n-acetylmuramoyl-l-alanyl-d-glutamate synthetaseG352_00382Not AvailablePositive81716 - 8264932015.2
type i modular polyketide synthaseG352_00387Not AvailablePositive82650 - 86090121909.0
type i pks modular polyketide synthaseG352_00392Not AvailablePositive86080 - 8695330603.3
thiol peroxidaseG352_00397Not AvailableNegative87516 - 8804619410.7
transposaseG352_00402Not AvailableNegative88710 - 8984343664.1
gtp cyclohydrolase iG352_00407Not AvailableNegative90064 - 9071723602.2

Displaying genes 131 – 140 of 5609 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.