Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease iii | D7004_04755 | Not Available | Positive | 1185486 - 1186151 | 25114.7 |
| recombinase reca | D7004_04760 | Not Available | Positive | 1186455 - 1187468 | 36364.9 |
| hypothetical protein | D7004_04765 | Not Available | Negative | 1188083 - 1188286 | 7446.51 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | D7004_04770 | Not Available | Negative | 1188390 - 1189391 | 36230.7 |
| duf748 domain-containing protein | D7004_04775 | Not Available | Positive | 1189466 - 1193890 | 164356.0 |
| acetate kinase | D7004_04780 | Not Available | Negative | 1193920 - 1195119 | 43408.3 |
| phosphate acetyltransferase | D7004_04785 | Not Available | Negative | 1195128 - 1197215 | 76274.6 |
| membrane or secreted protein | D7004_04790 | Not Available | Positive | 1197390 - 1199930 | 95584.3 |
| organic hydroperoxide resistance protein | D7004_04795 | Not Available | Negative | 1200028 - 1200483 | 15466.1 |
| marr family transcriptional regulator | D7004_04800 | Not Available | Negative | 1200496 - 1200921 | 16098.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

