Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl-diphosphate phosphatase | D7004_04700 | Not Available | Positive | 1170972 - 1171766 | 28961.5 |
| trna pseudouridine(55) synthase trub | D7004_04705 | Not Available | Positive | 1171793 - 1172524 | 27450.9 |
| yitt family protein | D7004_04710 | Not Available | Positive | 1172521 - 1173381 | 31183.9 |
| bifunctional riboflavin kinase/fad synthetase | D7004_04715 | Not Available | Positive | 1173565 - 1174566 | 37476.8 |
| duf2157 domain-containing protein | D7004_04725 | Not Available | Positive | 1177283 - 1178317 | 39667.4 |
| lysine transporter lyse | D7004_04730 | Not Available | Negative | 1178309 - 1178962 | 24469.7 |
| excinuclease abc subunit uvra | D7004_04735 | Not Available | Negative | 1178971 - 1181784 | 104203.0 |
| sigma-70 family rna polymerase sigma factor | D7004_04740 | Not Available | Positive | 1182045 - 1182629 | 23013.0 |
| hypothetical protein | D7004_04745 | Not Available | Positive | 1182717 - 1182911 | 7200.45 |
| mfs transporter | D7004_04750 | Not Available | Positive | 1183044 - 1184228 | 41748.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

