Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid mobilization relaxosome protein mobc | D7004_04430 | Not Available | Positive | 1105440 - 1105847 | 15685.2 |
| relaxase | D7004_04435 | Not Available | Positive | 1105832 - 1107085 | 46745.1 |
| conjugal transfer protein trag | D7004_04440 | Not Available | Positive | 1107113 - 1109167 | 76949.6 |
| rna polymerase sigma-70 factor | D7004_04445 | Not Available | Positive | 1109535 - 1110137 | 23132.0 |
| fecr family protein | D7004_04450 | Not Available | Positive | 1110217 - 1111431 | 44993.4 |
| susc/raga family tonb-linked outer membrane protein | D7004_04455 | Not Available | Positive | 1111641 - 1115219 | 132861.0 |
| ragb/susd family nutrient uptake outer membrane protein | D7004_04460 | Not Available | Positive | 1115283 - 1116776 | 55947.9 |
| ahpc/tsa family protein | D7004_04465 | Not Available | Positive | 1116709 - 1117905 | 44103.2 |
| insulinase family protein | D7004_04470 | Not Available | Positive | 1118089 - 1120824 | 102875.0 |
| hypothetical protein | D7004_04475 | Not Available | Positive | 1121004 - 1122203 | 47003.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

