Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonic anhydrase | D7004_04380 | Not Available | Negative | 1094018 - 1094644 | 23771.7 |
| susc/raga family tonb-linked outer membrane protein | D7004_04385 | Not Available | Positive | 1095125 - 1098205 | 112271.0 |
| ragb/susd family nutrient uptake outer membrane protein | D7004_04390 | Not Available | Positive | 1098195 - 1099817 | 58923.7 |
| crp/fnr family transcriptional regulator | D7004_04395 | Not Available | Negative | 1099875 - 1100489 | 23285.4 |
| had family hydrolase | D7004_04400 | Not Available | Positive | 1100565 - 1101257 | 26647.4 |
| chloramphenicol acetyltransferase | D7004_04405 | Not Available | Positive | 1101254 - 1101889 | 24423.9 |
| Trna-ala | Not Available | Not Available | Positive | 1102036 - 1102109 | Not Available |
| hypothetical protein | D7004_04415 | Not Available | Positive | 1102082 - 1103401 | 51372.7 |
| hypothetical protein | D7004_04420 | Not Available | Negative | 1103405 - 1103707 | 11674.7 |
| tir domain-containing protein | D7004_04425 | Not Available | Positive | 1103838 - 1104986 | 45204.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

