Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | D7004_04330 | Not Available | Positive | 1080894 - 1082879 | 73300.5 |
| tonb-dependent receptor | D7004_04335 | Not Available | Positive | 1082960 - 1085314 | 86066.4 |
| ribose-5-phosphate isomerase rpia | D7004_04340 | Not Available | Positive | 1085586 - 1086275 | 24404.7 |
| hypothetical protein | D7004_04345 | Not Available | Positive | 1087103 - 1087489 | 14402.0 |
| duf3887 domain-containing protein | D7004_04350 | Not Available | Positive | 1087847 - 1089166 | 48486.2 |
| yihy/virulence factor brkb family protein | D7004_04355 | Not Available | Positive | 1089338 - 1090306 | 35393.8 |
| yjbq family protein | D7004_04360 | Not Available | Negative | 1090321 - 1090743 | 15857.8 |
| hypothetical protein | D7004_04365 | Not Available | Negative | 1090746 - 1092056 | 47101.0 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | D7004_04370 | Not Available | Positive | 1092273 - 1093112 | 31369.1 |
| sdr family oxidoreductase | D7004_04375 | Not Available | Positive | 1093136 - 1093900 | 26834.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

