Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | D7004_04180 | Not Available | Positive | 1038530 - 1039867 | 47643.9 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | D7004_04185 | Not Available | Positive | 1040043 - 1041023 | 36549.2 |
| hypothetical protein | D7004_04190 | Not Available | Positive | 1041202 - 1041540 | 12009.8 |
| 30s ribosomal protein s12 methylthiotransferase rimo | D7004_04195 | Not Available | Negative | 1041600 - 1042931 | 50430.7 |
| signal recognition particle-docking protein ftsy | D7004_04200 | Not Available | Negative | 1043065 - 1044027 | 35000.2 |
| duf4295 domain-containing protein | D7004_04205 | Not Available | Negative | 1044190 - 1044345 | 5550.86 |
| 50s ribosomal protein l33 | D7004_04210 | Not Available | Negative | 1044433 - 1044615 | 7012.72 |
| 50s ribosomal protein l28 | D7004_04215 | Not Available | Negative | 1044660 - 1044893 | 8816.89 |
| hypothetical protein | D7004_04220 | Not Available | Negative | 1044988 - 1045476 | 18489.4 |
| acetate--coa ligase | D7004_04225 | Not Available | Positive | 1045605 - 1047500 | 70483.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

