Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system needle protein hcp | D7004_03870 | Not Available | Positive | 973023 - 973418 | 14700.5 |
| type vi secretion system needle protein hcp | D7004_03875 | Not Available | Positive | 973499 - 973894 | 14613.2 |
| type iv secretion protein rhs | D7004_03880 | Not Available | Positive | 974062 - 975945 | 68848.2 |
| hypothetical protein | D7004_03885 | Not Available | Positive | 975948 - 976808 | 32835.9 |
| duf4280 domain-containing protein | D7004_03890 | Not Available | Positive | 976811 - 978406 | 56649.4 |
| duf600 family protein | D7004_03895 | Not Available | Positive | 978419 - 978847 | 16498.3 |
| hypothetical protein | D7004_03900 | Not Available | Positive | 978886 - 979215 | 12471.5 |
| hypothetical protein | D7004_03910 | Not Available | Negative | 980755 - 981534 | 30701.6 |
| hypothetical protein | D7004_03915 | Not Available | Negative | 981675 - 982307 | 24280.3 |
| hypothetical protein | D7004_03920 | Not Available | Negative | 982732 - 983190 | 17358.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

