Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2480 family protein | D7004_00290 | Not Available | Positive | 63277 - 63792 | 19255.3 |
| duf3108 domain-containing protein | D7004_00295 | Not Available | Positive | 63883 - 64656 | 29464.4 |
| duf3109 family protein | D7004_00300 | Not Available | Positive | 64659 - 65222 | 21312.6 |
| hypothetical protein | D7004_00305 | Not Available | Negative | 65339 - 65545 | 7547.57 |
| dtdp-glucose 4,6-dehydratase | D7004_00310 | Not Available | Positive | 66020 - 67072 | 39929.5 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | D7004_00315 | Not Available | Positive | 67072 - 67614 | 20116.9 |
| dtdp-4-dehydrorhamnose reductase | D7004_00320 | Not Available | Positive | 67616 - 68476 | 31292.3 |
| glucose-1-phosphate thymidylyltransferase | D7004_00325 | Not Available | Positive | 68546 - 69406 | 31329.1 |
| nucleotide sugar dehydrogenase | D7004_00330 | Not Available | Positive | 71009 - 72289 | 46895.4 |
| gdp-mannose 4,6-dehydratase | D7004_00335 | Not Available | Positive | 73681 - 74832 | 43529.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

