Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | D7004_02960 | Not Available | Positive | 725461 - 725865 | 14899.2 |
| sugar transferase | D7004_02965 | Not Available | Positive | 726066 - 727067 | 38062.7 |
| duf1080 domain-containing protein | D7004_02970 | Not Available | Positive | 727407 - 728126 | 27023.4 |
| twin-arginine translocase tata/tate family subunit | D7004_02975 | Not Available | Negative | 728231 - 728434 | 7050.9 |
| nad(p)-dependent alcohol dehydrogenase | D7004_02980 | Not Available | Negative | 730342 - 731385 | 37922.6 |
| glycoside hydrolase family 127 protein | D7004_02985 | Not Available | Negative | 731530 - 733497 | 73998.4 |
| l-rhamnose mutarotase | D7004_02990 | Not Available | Negative | 733526 - 733840 | 12086.5 |
| beta-galactosidase | D7004_02995 | Not Available | Negative | 733860 - 735686 | 69180.1 |
| beta-glucanase | D7004_03000 | Not Available | Negative | 735758 - 736870 | 41760.8 |
| ragb/susd family nutrient uptake outer membrane protein | D7004_03005 | Not Available | Negative | 736971 - 738596 | 60076.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

