Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate adenylyltransferase subunit cysd | D7004_02910 | Not Available | Negative | 709739 - 710644 | 34542.9 |
| phosphoadenylyl-sulfate reductase | D7004_02915 | Not Available | Negative | 710967 - 711683 | 27760.7 |
| siroheme synthase | D7004_02920 | Not Available | Negative | 711687 - 713198 | 54737.0 |
| uroporphyrinogen-iii c-methyltransferase | D7004_02925 | Not Available | Negative | 713182 - 713952 | 27464.1 |
| hepn domain-containing protein | D7004_02930 | Not Available | Negative | 714109 - 716202 | 78431.2 |
| rrf2 family transcriptional regulator | D7004_02935 | Not Available | Negative | 716437 - 716883 | 16412.2 |
| response regulator | D7004_02940 | Not Available | Positive | 717008 - 718765 | 65767.3 |
| metallophosphoesterase | D7004_02945 | Not Available | Positive | 718868 - 720094 | 46316.5 |
| l-glyceraldehyde 3-phosphate reductase | D7004_02950 | Not Available | Positive | 720212 - 721210 | 37206.7 |
| pas domain s-box protein | D7004_02955 | Not Available | Negative | 721292 - 724738 | 131512.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

