Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| relaxase/mobilization nuclease | D7004_02650 | Not Available | Negative | 648626 - 649834 | 45633.1 |
| atp-binding protein | D7004_02655 | Not Available | Negative | 649842 - 649967 | 4908.9 |
| atp-dependent endonuclease | D7004_02660 | Not Available | Negative | 650661 - 652094 | 54776.7 |
| hypothetical protein | D7004_02665 | Not Available | Negative | 652475 - 653614 | 41813.5 |
| duf3822 family protein | D7004_02670 | Not Available | Positive | 653847 - 654653 | 30537.8 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | D7004_02675 | Not Available | Positive | 654644 - 655180 | 20116.4 |
| pyridoxal-phosphate dependent enzyme | D7004_02680 | Not Available | Negative | 655405 - 656766 | 49693.5 |
| dna-protecting protein dpra | D7004_02685 | Not Available | Negative | 656947 - 658041 | 40093.7 |
| hypothetical protein | D7004_02690 | Not Available | Negative | 658098 - 658364 | 10199.3 |
| hypothetical protein | D7004_02695 | Not Available | Negative | 658506 - 659999 | 53902.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

