Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D7004_02500 | Not Available | Positive | 612582 - 612779 | 6896.41 |
| adenylosuccinate lyase | D7004_02505 | Not Available | Positive | 612903 - 614249 | 50558.0 |
| nifu family protein | D7004_02510 | Not Available | Positive | 614337 - 614888 | 20076.8 |
| inositol monophosphatase | D7004_02515 | Not Available | Negative | 614963 - 615751 | 29625.5 |
| diacylglyceryl transferase | D7004_02520 | Not Available | Negative | 615802 - 616956 | 42989.1 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | D7004_02525 | Not Available | Negative | 617325 - 618647 | 49655.8 |
| ubix family flavin prenyltransferase | D7004_02530 | Not Available | Negative | 618758 - 619324 | 20789.0 |
| hypothetical protein | D7004_02535 | Not Available | Negative | 619828 - 620700 | 32175.3 |
| rna-binding protein | D7004_02540 | Not Available | Positive | 620974 - 621270 | 10948.4 |
| hypothetical protein | D7004_02545 | Not Available | Positive | 621468 - 623891 | 89453.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

