Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yggs family pyridoxal phosphate-dependent enzyme | D7004_02450 | Not Available | Positive | 604991 - 605692 | 26496.1 |
| gnat family n-acetyltransferase | D7004_02455 | Not Available | Positive | 605701 - 606168 | 17970.4 |
| aspartate kinase | D7004_02460 | Not Available | Positive | 606172 - 607437 | 47771.0 |
| hypothetical protein | D7004_02465 | Not Available | Positive | 607513 - 608697 | 44341.2 |
| cold-shock protein | D7004_02470 | Not Available | Negative | 608762 - 608959 | 7341.77 |
| peroxiredoxin | D7004_02475 | Not Available | Negative | 609216 - 609851 | 23574.9 |
| serine protease | D7004_02480 | Not Available | Negative | 609995 - 611089 | 40412.9 |
| sigma-70 family rna polymerase sigma factor | D7004_02485 | Not Available | Negative | 611098 - 611664 | 21846.1 |
| hypothetical protein | D7004_02490 | Not Available | Positive | 611871 - 612089 | 7553.91 |
| hypothetical protein | D7004_02495 | Not Available | Positive | 612227 - 612445 | 7528.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

