Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flippase | D7004_00190 | Not Available | Negative | 39967 - 41286 | 48571.1 |
| hypothetical protein | D7004_00195 | Not Available | Positive | 41395 - 42294 | 34577.3 |
| dinb family protein | D7004_00200 | Not Available | Negative | 42309 - 42827 | 19698.0 |
| noncanonical pyrimidine nucleotidase, yjjg family | D7004_00205 | Not Available | Negative | 42849 - 43547 | 26775.8 |
| uracil phosphoribosyltransferase | D7004_00210 | Not Available | Negative | 43668 - 44312 | 23794.2 |
| hypothetical protein | D7004_00215 | Not Available | Negative | 44396 - 44908 | 19391.5 |
| hupe/urej family protein | D7004_00220 | Not Available | Positive | 45005 - 45583 | 21808.3 |
| m1 family peptidase | D7004_00225 | Not Available | Positive | 45595 - 47967 | 89086.1 |
| excinuclease abc subunit uvrb | D7004_00230 | Not Available | Positive | 48223 - 50265 | 77395.9 |
| ywbe family protein | D7004_00235 | Not Available | Positive | 50285 - 50482 | 7206.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

