Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-independent coproporphyrinogen iii oxidase | D7004_02250 | Not Available | Negative | 560541 - 561887 | 51241.7 |
| lactate dehydrogenase | D7004_02255 | Not Available | Negative | 561887 - 562315 | 15578.8 |
| response regulator | D7004_02260 | Not Available | Negative | 562550 - 563581 | 38590.3 |
| pas domain s-box protein | D7004_02265 | Not Available | Negative | 563605 - 564795 | 44701.6 |
| hypothetical protein | D7004_02270 | Not Available | Negative | 564851 - 566620 | 67351.9 |
| Trna-pro | Not Available | Not Available | Positive | 567120 - 567196 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 567246 - 567322 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 567408 - 567497 | Not Available |
| hdig domain-containing protein | D7004_02290 | Not Available | Negative | 567576 - 569582 | 76899.8 |
| spfh domain-containing protein | D7004_02295 | Not Available | Positive | 569772 - 570632 | 31569.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

