Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| j domain-containing protein | D7004_02105 | Not Available | Negative | 531778 - 532665 | 33450.5 |
| sdr family oxidoreductase | D7004_02110 | Not Available | Negative | 532697 - 533437 | 25725.0 |
| universal stress protein | D7004_02115 | Not Available | Negative | 533605 - 534477 | 32155.4 |
| murein l,d-transpeptidase | D7004_02120 | Not Available | Positive | 534632 - 536464 | 70207.0 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 535040 - 535139 | Not Available |
| abc transporter permease | D7004_02125 | Not Available | Positive | 536663 - 537433 | 27533.3 |
| abc transporter atp-binding protein | D7004_02130 | Not Available | Positive | 537433 - 538218 | 29317.8 |
| mce family protein | D7004_02135 | Not Available | Positive | 538224 - 539213 | 35925.6 |
| nad-dependent succinate-semialdehyde dehydrogenase | D7004_02140 | Not Available | Negative | 539530 - 540912 | 49680.6 |
| bon domain-containing protein | D7004_02145 | Not Available | Negative | 540955 - 541635 | 25119.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

