Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage holin family protein | D7004_20405 | Not Available | Negative | 4775080 - 4775460 | 14219.3 |
| ytxh domain-containing protein | D7004_20410 | Not Available | Negative | 4775508 - 4775774 | 9457.1 |
| ai-2e family transporter | D7004_20415 | Not Available | Negative | 4775845 - 4776894 | 39219.5 |
| sigma-54-dependent fis family transcriptional regulator | D7004_20420 | Not Available | Negative | 4776958 - 4778373 | 53164.9 |
| enoyl-coa hydratase | D7004_20425 | Not Available | Negative | 4778472 - 4779251 | 27598.2 |
| cobalamin b12-binding domain-containing protein | D7004_20430 | Not Available | Negative | 4779255 - 4779674 | 15123.5 |
| glutamine--trna ligase/yqey domain fusion protein | D7004_20435 | Not Available | Positive | 4779990 - 4781645 | 63476.1 |
| n-acetylmuramoyl-l-alanine amidase | D7004_20440 | Not Available | Negative | 4781980 - 4782816 | 30935.1 |
| zn-dependent hydrolase | D7004_20445 | Not Available | Positive | 4782931 - 4784613 | 62848.8 |
| tonb-dependent receptor | D7004_20450 | Not Available | Positive | 4784867 - 4787308 | 91094.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

