Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D7004_20355 | Not Available | Positive | 4767410 - 4768441 | 39767.1 |
| duf4325 domain-containing protein | D7004_20360 | Not Available | Positive | 4768438 - 4768776 | 12646.4 |
| hypothetical protein | D7004_20365 | Not Available | Positive | 4768773 - 4769351 | 22369.4 |
| zinc ribbon domain-containing protein | D7004_20370 | Not Available | Positive | 4769404 - 4770441 | 38216.6 |
| hypothetical protein | D7004_20375 | Not Available | Positive | 4770425 - 4771222 | 30119.7 |
| nuclear transport factor 2 family protein | D7004_20380 | Not Available | Positive | 4771329 - 4771721 | 15430.7 |
| helix-turn-helix domain-containing protein | D7004_20385 | Not Available | Negative | 4771729 - 4772085 | 13498.7 |
| type ii toxin-antitoxin system higb family toxin | D7004_20390 | Not Available | Negative | 4772085 - 4772411 | 12714.3 |
| aspartate--trna ligase | D7004_20395 | Not Available | Positive | 4772545 - 4774290 | 66320.3 |
| hypothetical protein | D7004_20400 | Not Available | Negative | 4774656 - 4775093 | 16322.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

