Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tagaturonate reductase | D7004_20250 | Not Available | Positive | 4739437 - 4740948 | 56677.7 |
| altronate dehydratase | D7004_20255 | Not Available | Positive | 4740950 - 4742596 | 59905.2 |
| glucuronate isomerase | D7004_20260 | Not Available | Positive | 4742758 - 4744158 | 53656.4 |
| sugar kinase | D7004_20265 | Not Available | Positive | 4744373 - 4745422 | 38770.2 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | D7004_20270 | Not Available | Positive | 4745422 - 4746081 | 24130.6 |
| mfs transporter | D7004_20275 | Not Available | Positive | 4746101 - 4747540 | 53306.6 |
| nadp-dependent glyceraldehyde-3-phosphate dehydrogenase | D7004_20280 | Not Available | Positive | 4747658 - 4749283 | 60080.5 |
| rhamnogalacturonan acetylesterase | D7004_20285 | Not Available | Negative | 4749370 - 4750122 | 27873.7 |
| pectin esterase | D7004_20290 | Not Available | Negative | 4750125 - 4751156 | 38359.7 |
| ragb/susd family nutrient uptake outer membrane protein | D7004_20295 | Not Available | Negative | 4751251 - 4753041 | 65885.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

