Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein rada | D7004_19700 | Not Available | Positive | 4622616 - 4623995 | 50453.0 |
| duf4920 domain-containing protein | D7004_19705 | Not Available | Positive | 4624341 - 4624805 | 16970.0 |
| branched-chain amino acid aminotransferase | D7004_19710 | Not Available | Negative | 4624893 - 4625957 | 39353.8 |
| tryptophan 2,3-dioxygenase | D7004_19715 | Not Available | Negative | 4626086 - 4627051 | 37726.2 |
| chloride channel protein | D7004_19720 | Not Available | Positive | 4627196 - 4628485 | 46162.6 |
| hypothetical protein | D7004_19725 | Not Available | Negative | 4628785 - 4629399 | 24542.2 |
| phosphoserine phosphatase | D7004_19730 | Not Available | Negative | 4629501 - 4630802 | 49401.7 |
| nad-dependent epimerase/dehydratase family protein | D7004_19735 | Not Available | Negative | 4630802 - 4631764 | 35024.2 |
| arginase | D7004_19740 | Not Available | Positive | 4631835 - 4633016 | 44963.8 |
| ahpc/tsa family protein | D7004_19745 | Not Available | Positive | 4633083 - 4634225 | 41508.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

