Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate 1-decarboxylase | D7004_19650 | Not Available | Negative | 4611991 - 4612341 | 12769.6 |
| pantoate--beta-alanine ligase | D7004_19655 | Not Available | Negative | 4612447 - 4613292 | 31204.9 |
| starch synthase | D7004_19660 | Not Available | Positive | 4613436 - 4614266 | 31614.7 |
| duf4270 family protein | D7004_19665 | Not Available | Positive | 4614288 - 4615721 | 51542.8 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | D7004_19670 | Not Available | Positive | 4615854 - 4617692 | 67691.0 |
| single-stranded dna-binding protein | D7004_19675 | Not Available | Negative | 4617758 - 4618195 | 16430.5 |
| a/g-specific adenine glycosylase | D7004_19680 | Not Available | Negative | 4618273 - 4619316 | 40350.2 |
| integration host factor subunit beta | D7004_19685 | Not Available | Positive | 4619485 - 4619787 | 11131.6 |
| hypothetical protein | D7004_19690 | Not Available | Positive | 4619798 - 4620670 | 31074.4 |
| rne/rng family ribonuclease | D7004_19695 | Not Available | Positive | 4620952 - 4622502 | 58670.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

