Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-galactopyranose mutase | D7004_19600 | Not Available | Positive | 4600418 - 4601542 | 44036.9 |
| duf4422 domain-containing protein | D7004_19605 | Not Available | Positive | 4601523 - 4602344 | 32494.2 |
| hypothetical protein | D7004_19610 | Not Available | Negative | 4602349 - 4603437 | 43162.1 |
| translation initiation factor if-2 | D7004_19615 | Not Available | Negative | 4603771 - 4606848 | 110979.0 |
| transcription termination/antitermination protein nusa | D7004_19620 | Not Available | Negative | 4606911 - 4608155 | 46971.8 |
| ribosome assembly cofactor rimp | D7004_19625 | Not Available | Negative | 4608220 - 4608684 | 17162.8 |
| hypothetical protein | D7004_19630 | Not Available | Negative | 4608806 - 4609234 | 15814.2 |
| phage holin family protein | D7004_19635 | Not Available | Positive | 4609253 - 4609597 | 11981.5 |
| acyl-coa dehydrogenase | D7004_19640 | Not Available | Negative | 4609712 - 4610851 | 41609.9 |
| upf0104 family protein | D7004_19645 | Not Available | Negative | 4611013 - 4611981 | 36747.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

