Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration protein ruva | D7004_19350 | Not Available | Negative | 4545286 - 4545870 | 21380.0 |
| nadp-dependent malic enzyme | D7004_19355 | Not Available | Negative | 4545922 - 4548243 | 84847.4 |
| lysm peptidoglycan-binding domain-containing protein | D7004_19360 | Not Available | Negative | 4548349 - 4549752 | 52657.8 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | D7004_19365 | Not Available | Negative | 4549915 - 4551345 | 51999.9 |
| twin-arginine translocase tata/tate family subunit | D7004_19370 | Not Available | Negative | 4551361 - 4551537 | 6222.76 |
| twin-arginine translocase tata/tate family subunit | D7004_19375 | Not Available | Negative | 4551573 - 4551959 | 14016.7 |
| peptidase m23 | D7004_19380 | Not Available | Negative | 4552007 - 4553311 | 48735.5 |
| duf4292 domain-containing protein | D7004_19385 | Not Available | Negative | 4553426 - 4554217 | 29286.6 |
| hypothetical protein | D7004_19390 | Not Available | Negative | 4554195 - 4555889 | 63816.2 |
| polysaccharide biosynthesis protein | D7004_19395 | Not Available | Negative | 4556170 - 4557621 | 55859.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

