Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D7004_19250 | Not Available | Positive | 4515865 - 4516239 | 14527.8 |
| rna-binding transcriptional accessory protein | D7004_19255 | Not Available | Positive | 4516773 - 4519064 | 84821.8 |
| mechanosensitive ion channel family protein | D7004_19260 | Not Available | Negative | 4519287 - 4520366 | 41292.6 |
| orf6n domain-containing protein | D7004_19265 | Not Available | Positive | 4520485 - 4521024 | 21133.6 |
| 50s ribosomal protein l13 | D7004_19270 | Not Available | Positive | 4521410 - 4521853 | 16390.1 |
| 30s ribosomal protein s9 | D7004_19275 | Not Available | Positive | 4521857 - 4522243 | 14161.4 |
| 30s ribosomal protein s2 | D7004_19280 | Not Available | Positive | 4522262 - 4523122 | 31829.6 |
| elongation factor ts | D7004_19285 | Not Available | Positive | 4523251 - 4524096 | 29705.4 |
| n-acetylglucosamine-6-phosphate deacetylase | D7004_19290 | Not Available | Positive | 4524208 - 4525302 | 39868.9 |
| ump kinase | D7004_19295 | Not Available | Positive | 4525367 - 4526071 | 26010.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

