Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | D7004_19145 | Not Available | Positive | 4497778 - 4498365 | 22579.9 |
| zf-hc2 domain-containing protein | D7004_19150 | Not Available | Positive | 4498367 - 4498633 | 10001.4 |
| hypothetical protein | D7004_19155 | Not Available | Positive | 4498693 - 4498956 | 9829.51 |
| ahpc/tsa family protein | D7004_19160 | Not Available | Positive | 4499004 - 4499585 | 21560.2 |
| hypothetical protein | D7004_19165 | Not Available | Positive | 4499640 - 4499846 | 7384.42 |
| na+/h+ antiporter nhaa | D7004_19170 | Not Available | Positive | 4500982 - 4502316 | 47699.4 |
| duf389 domain-containing protein | D7004_19175 | Not Available | Positive | 4502321 - 4503652 | 48966.1 |
| response regulator | D7004_19180 | Not Available | Positive | 4503977 - 4504342 | 13469.7 |
| mechanosensitive ion channel family protein | D7004_19185 | Not Available | Negative | 4504545 - 4505429 | 33133.9 |
| duf2254 domain-containing protein | D7004_19190 | Not Available | Positive | 4505879 - 4507108 | 46247.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

