Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m1 family peptidase | D7004_19035 | Not Available | Negative | 4477437 - 4479314 | 71010.4 |
| transcription elongation factor grea | D7004_19040 | Not Available | Positive | 4479593 - 4480066 | 17202.7 |
| hit family protein | D7004_19045 | Not Available | Positive | 4480300 - 4480698 | 14720.0 |
| pirin family protein | D7004_19050 | Not Available | Negative | 4480713 - 4481603 | 33696.3 |
| 12-oxophytodienoate reductase | D7004_19055 | Not Available | Negative | 4481706 - 4482806 | 40259.3 |
| transcriptional regulator | D7004_19060 | Not Available | Negative | 4482818 - 4483120 | 11316.5 |
| marr family transcriptional regulator | D7004_19075 | Not Available | Negative | 4485300 - 4485734 | 16177.8 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | D7004_19080 | Not Available | Positive | 4485926 - 4486663 | 27969.4 |
| cdgsh iron-sulfur domain-containing protein | D7004_19085 | Not Available | Negative | 4487077 - 4487301 | 8161.71 |
| duf5117 domain-containing protein | D7004_19090 | Not Available | Negative | 4487483 - 4489993 | 92049.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

