Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit b | D7004_18615 | Not Available | Negative | 4387578 - 4388072 | 18517.6 |
| atp synthase f0 subunit c | D7004_18620 | Not Available | Negative | 4388160 - 4388372 | 6571.34 |
| atp synthase f0 subunit a | D7004_18625 | Not Available | Negative | 4388414 - 4389538 | 41368.3 |
| hypothetical protein | D7004_18630 | Not Available | Negative | 4389553 - 4389909 | 13251.1 |
| atpz/atpi family protein | D7004_18635 | Not Available | Negative | 4390071 - 4390295 | 8079.07 |
| gliding motility protein | D7004_18640 | Not Available | Positive | 4390407 - 4393178 | 105934.0 |
| penicillin-binding protein | D7004_18645 | Not Available | Positive | 4393180 - 4395402 | 83166.9 |
| hypothetical protein | D7004_18650 | Not Available | Positive | 4395473 - 4395703 | 9113.06 |
| type ii toxin-antitoxin system vapc family toxin | D7004_18655 | Not Available | Positive | 4395706 - 4396074 | 13973.2 |
| excinuclease abc subunit c | D7004_18660 | Not Available | Positive | 4396104 - 4397906 | 69301.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

