Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lycopene cyclase domain-containing protein | D7004_18260 | Not Available | Negative | 4319533 - 4320225 | 27184.1 |
| hypothetical protein | D7004_18265 | Not Available | Negative | 4320226 - 4320756 | 20336.1 |
| phytoene desaturase | D7004_18270 | Not Available | Positive | 4320922 - 4322403 | 56362.6 |
| sigma-70 family rna polymerase sigma factor | D7004_18275 | Not Available | Negative | 4323020 - 4323550 | 20354.5 |
| udp-n-acetylmuramate dehydrogenase | D7004_18280 | Not Available | Negative | 4323685 - 4324701 | 36778.8 |
| hypothetical protein | D7004_18285 | Not Available | Positive | 4324810 - 4325331 | 20488.4 |
| hypothetical protein | D7004_18290 | Not Available | Positive | 4325803 - 4326009 | 7885.37 |
| hypothetical protein | D7004_18295 | Not Available | Positive | 4326009 - 4326386 | 15007.3 |
| hypothetical protein | D7004_18300 | Not Available | Negative | 4326398 - 4327405 | 37787.5 |
| is1595 family transposase | D7004_18305 | Not Available | Negative | 4327402 - 4328370 | 37084.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

