Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | D7004_18160 | Not Available | Negative | 4291989 - 4292543 | 21843.2 |
| alpha-amylase | D7004_18165 | Not Available | Negative | 4292658 - 4294544 | 70280.0 |
| mfs transporter | D7004_18170 | Not Available | Negative | 4294630 - 4296006 | 50754.9 |
| alpha-amylase | D7004_18175 | Not Available | Negative | 4296128 - 4297972 | 69310.4 |
| glycoside hydrolase family 65 protein | D7004_18180 | Not Available | Negative | 4297969 - 4300287 | 88366.1 |
| beta-phosphoglucomutase | D7004_18185 | Not Available | Negative | 4300362 - 4301060 | 25407.3 |
| alpha-amylase | D7004_18190 | Not Available | Negative | 4301128 - 4302972 | 70574.1 |
| susf/suse family outer membrane protein | D7004_18195 | Not Available | Negative | 4303137 - 4304171 | 36033.9 |
| ragb/susd family nutrient uptake outer membrane protein | D7004_18200 | Not Available | Negative | 4304189 - 4305793 | 58407.4 |
| tonb-dependent receptor | D7004_18205 | Not Available | Negative | 4305807 - 4308773 | 107128.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

