Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l25/general stress protein ctc | D7004_18105 | Not Available | Negative | 4273959 - 4274543 | 21235.1 |
| ribose-phosphate pyrophosphokinase | D7004_18110 | Not Available | Negative | 4274733 - 4275674 | 34000.2 |
| Trna-gln | Not Available | Not Available | Positive | 4275746 - 4275819 | Not Available |
| hypothetical protein | D7004_18115 | Not Available | Negative | 4275739 - 4275777 | 1499.72 |
| duf2723 domain-containing protein | D7004_18125 | Not Available | Positive | 4276028 - 4279054 | 114920.0 |
| duf2723 domain-containing protein | D7004_18130 | Not Available | Positive | 4279284 - 4282325 | 114041.0 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | D7004_18135 | Not Available | Negative | 4282621 - 4283583 | 35684.2 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | D7004_18145 | Not Available | Negative | 4285398 - 4286978 | 58429.0 |
| susc/raga family tonb-linked outer membrane protein | D7004_18150 | Not Available | Negative | 4286998 - 4290339 | 119943.0 |
| duf4974 domain-containing protein | D7004_18155 | Not Available | Negative | 4290456 - 4291520 | 40106.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

