Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional oligoribonuclease/pap phosphatase nrna | D7004_18055 | Not Available | Negative | 4264841 - 4265851 | 37398.5 |
| tonb-dependent receptor | D7004_18060 | Not Available | Negative | 4266000 - 4268396 | 86429.0 |
| nucleoside-diphosphate kinase | D7004_18065 | Not Available | Positive | 4268753 - 4269172 | 15240.9 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | D7004_18070 | Not Available | Positive | 4269302 - 4270030 | 26227.8 |
| hypothetical protein | D7004_18075 | Not Available | Positive | 4270079 - 4270267 | 6538.52 |
| duf721 domain-containing protein | D7004_18080 | Not Available | Negative | 4270318 - 4270608 | 11172.0 |
| dna replication/repair protein recf | D7004_18085 | Not Available | Negative | 4270601 - 4271704 | 42476.3 |
| hypothetical protein | D7004_18090 | Not Available | Positive | 4271741 - 4272199 | 17476.0 |
| hypothetical protein | D7004_18095 | Not Available | Positive | 4272322 - 4272987 | 24440.1 |
| aminoacyl-trna hydrolase | D7004_18100 | Not Available | Negative | 4273116 - 4273676 | 20685.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

