Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D7004_17755 | Not Available | Negative | 4194273 - 4195175 | 34083.8 |
| glycoside hydrolase | D7004_17760 | Not Available | Positive | 4195383 - 4196930 | 58892.0 |
| duf5009 domain-containing protein | D7004_17765 | Not Available | Negative | 4196931 - 4198073 | 42312.7 |
| glucosamine-6-phosphate deaminase | D7004_17770 | Not Available | Negative | 4198209 - 4200134 | 72529.4 |
| anhydro-n-acetylmuramic acid kinase | D7004_17775 | Not Available | Positive | 4200292 - 4201488 | 43485.2 |
| susc/raga family tonb-linked outer membrane protein | D7004_17780 | Not Available | Positive | 4201559 - 4204732 | 114359.0 |
| ragb/susd family nutrient uptake outer membrane protein | D7004_17785 | Not Available | Positive | 4204752 - 4206050 | 46803.1 |
| deor/glpr transcriptional regulator | D7004_17790 | Not Available | Negative | 4206094 - 4206840 | 27373.4 |
| susc/raga family tonb-linked outer membrane protein | D7004_17795 | Not Available | Positive | 4207076 - 4210177 | 111853.0 |
| ragb/susd family nutrient uptake outer membrane protein | D7004_17800 | Not Available | Positive | 4210194 - 4211783 | 58927.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

