Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent rna methyltransferase | D7004_17705 | Not Available | Negative | 4182278 - 4183471 | 44579.4 |
| duf3127 domain-containing protein | D7004_17710 | Not Available | Positive | 4183544 - 4183918 | 13675.9 |
| ghkl domain-containing protein | D7004_17715 | Not Available | Positive | 4184141 - 4185958 | 69458.1 |
| dna-binding response regulator | D7004_17720 | Not Available | Positive | 4186141 - 4186836 | 26430.1 |
| 1,4-dihydroxy-6-naphthoate synthase | D7004_17725 | Not Available | Negative | 4186845 - 4187672 | 30968.4 |
| futalosine hydrolase | D7004_17730 | Not Available | Negative | 4187713 - 4188336 | 22996.5 |
| 6-carboxytetrahydropterin synthase | D7004_17735 | Not Available | Positive | 4188428 - 4188838 | 15641.5 |
| gtp cyclohydrolase i fole | D7004_17740 | Not Available | Positive | 4188844 - 4189476 | 23835.8 |
| [acyl-carrier-protein] s-malonyltransferase | D7004_17745 | Not Available | Positive | 4189558 - 4190439 | 30996.4 |
| hamp domain-containing protein | D7004_17750 | Not Available | Positive | 4190543 - 4194271 | 142950.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

