Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | D7004_17505 | Not Available | Positive | 4141221 - 4142258 | 37882.1 |
| duf2911 domain-containing protein | D7004_17510 | Not Available | Negative | 4142350 - 4142919 | 21093.5 |
| hypothetical protein | D7004_17515 | Not Available | Negative | 4142969 - 4143154 | 6710.26 |
| tetr/acrr family transcriptional regulator | D7004_17520 | Not Available | Positive | 4143477 - 4144103 | 23615.8 |
| tolc family protein | D7004_17525 | Not Available | Positive | 4144100 - 4145419 | 48324.0 |
| hlyd family secretion protein | D7004_17530 | Not Available | Positive | 4145429 - 4146508 | 38633.7 |
| dha2 family efflux mfs transporter permease subunit | D7004_17535 | Not Available | Positive | 4146516 - 4148063 | 56014.6 |
| phosphoenolpyruvate carboxylase | D7004_17540 | Not Available | Positive | 4148677 - 4151262 | 98004.5 |
| mbl fold metallo-hydrolase | D7004_17545 | Not Available | Positive | 4151959 - 4153341 | 51917.5 |
| glutamate-5-semialdehyde dehydrogenase | D7004_17550 | Not Available | Negative | 4153513 - 4154760 | 45503.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

