Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | D7004_17405 | Not Available | Negative | 4121525 - 4121896 | 13508.7 |
| response regulator | D7004_17410 | Not Available | Negative | 4121911 - 4125489 | 133383.0 |
| hybrid sensor histidine kinase/response regulator | D7004_17415 | Not Available | Negative | 4125515 - 4126642 | 42545.5 |
| metalloprotease | D7004_17420 | Not Available | Negative | 4126767 - 4127606 | 30297.4 |
| glutamate--trna ligase | D7004_17425 | Not Available | Negative | 4127696 - 4129204 | 56978.9 |
| sensor histidine kinase | D7004_17430 | Not Available | Positive | 4129429 - 4130634 | 46125.8 |
| dinb family protein | D7004_17435 | Not Available | Positive | 4130615 - 4131124 | 19724.3 |
| hotdog fold thioesterase | D7004_17440 | Not Available | Positive | 4131114 - 4131536 | 15522.9 |
| alpha/beta hydrolase | D7004_17445 | Not Available | Negative | 4131555 - 4132442 | 32880.4 |
| hypothetical protein | D7004_17450 | Not Available | Negative | 4132480 - 4132833 | 12543.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

