Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine-phosphate kinase | D7004_17305 | Not Available | Negative | 4092946 - 4093986 | 38197.6 |
| dicarboxylate/amino acid:cation symporter | D7004_17310 | Not Available | Negative | 4094029 - 4095264 | 43924.0 |
| quinolinate synthase nada | D7004_17315 | Not Available | Negative | 4095294 - 4096292 | 36971.9 |
| l-aspartate oxidase | D7004_17320 | Not Available | Positive | 4096742 - 4098328 | 59566.1 |
| gamma carbonic anhydrase family protein | D7004_17325 | Not Available | Positive | 4098398 - 4098910 | 18349.1 |
| hypothetical protein | D7004_17330 | Not Available | Negative | 4098928 - 4100571 | 61852.3 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | D7004_17335 | Not Available | Negative | 4100693 - 4102555 | 68936.9 |
| abc transporter atp-binding protein | D7004_17340 | Not Available | Negative | 4102666 - 4104528 | 70802.2 |
| hypothetical protein | D7004_17345 | Not Available | Negative | 4104803 - 4105438 | 22497.6 |
| rrna maturation rnase ybey | D7004_17350 | Not Available | Negative | 4105684 - 4106121 | 17006.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

