Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | D7004_17255 | Not Available | Positive | 4082488 - 4082874 | 14403.5 |
| phosphatidate cytidylyltransferase | D7004_17260 | Not Available | Negative | 4083719 - 4084528 | 30399.8 |
| hypothetical protein | D7004_17265 | Not Available | Negative | 4084577 - 4084783 | 7653.14 |
| cpbp family intramembrane metalloprotease | D7004_17270 | Not Available | Negative | 4084764 - 4085690 | 34951.7 |
| trna dihydrouridine synthase dusb | D7004_17275 | Not Available | Positive | 4085734 - 4086741 | 37938.6 |
| co2+/mg2+ efflux protein apag | D7004_17280 | Not Available | Positive | 4086778 - 4087164 | 14556.3 |
| zinc metallopeptidase | D7004_17285 | Not Available | Negative | 4088313 - 4089008 | 25623.4 |
| fad-binding oxidoreductase | D7004_17290 | Not Available | Positive | 4089093 - 4090229 | 42114.1 |
| formyltetrahydrofolate deformylase | D7004_17295 | Not Available | Negative | 4090230 - 4091069 | 31836.8 |
| dna recombination protein rmuc | D7004_17300 | Not Available | Positive | 4091230 - 4092606 | 52612.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

