Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | D7004_01655 | Not Available | Negative | 379139 - 380788 | 62398.9 |
| alpha-l-rhamnosidase | D7004_01660 | Not Available | Negative | 380797 - 383571 | 103075.0 |
| alpha-l-fucosidase | D7004_01665 | Not Available | Negative | 383599 - 385284 | 63199.7 |
| glycoside hydrolase family 95 protein | D7004_01670 | Not Available | Negative | 385323 - 387776 | 90753.5 |
| ragb/susd family nutrient uptake outer membrane protein | D7004_01675 | Not Available | Negative | 387956 - 389662 | 63206.6 |
| tonb-dependent receptor | D7004_01680 | Not Available | Negative | 389688 - 392774 | 113393.0 |
| duf5110 domain-containing protein | D7004_01685 | Not Available | Negative | 392884 - 395031 | 81298.2 |
| hypothetical protein | D7004_01690 | Not Available | Negative | 395036 - 397537 | 93949.7 |
| arac family transcriptional regulator | D7004_01695 | Not Available | Negative | 397846 - 398715 | 33459.3 |
| arabinose isomerase | D7004_01700 | Not Available | Negative | 398777 - 400207 | 52671.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

