Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc carboxypeptidase | D7004_16755 | Not Available | Negative | 3969575 - 3972070 | 93526.2 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | D7004_16760 | Not Available | Positive | 3972156 - 3973454 | 47843.6 |
| gliding motility lipoprotein gldh | D7004_16765 | Not Available | Negative | 3973664 - 3974155 | 19124.2 |
| hypothetical protein | D7004_16770 | Not Available | Negative | 3974124 - 3975569 | 54254.6 |
| hypothetical protein | D7004_16775 | Not Available | Negative | 3975572 - 3976720 | 43071.2 |
| hypothetical protein | D7004_16780 | Not Available | Positive | 3976924 - 3978429 | 54596.1 |
| tonb-dependent receptor | D7004_16785 | Not Available | Positive | 3978426 - 3979346 | 35046.5 |
| duf3575 domain-containing protein | D7004_16790 | Not Available | Negative | 3979433 - 3980164 | 26648.9 |
| holliday junction resolvase ruvx | D7004_16795 | Not Available | Positive | 3980360 - 3980776 | 15621.9 |
| o-methyltransferase | D7004_16800 | Not Available | Positive | 3980786 - 3981421 | 24197.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

