Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-diacylglycerol--serine o-phosphatidyltransferase | D7004_01605 | Not Available | Positive | 368012 - 368707 | 25671.0 |
| hpt domain-containing protein | D7004_01610 | Not Available | Negative | 368704 - 369087 | 14684.6 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | D7004_01615 | Not Available | Negative | 369104 - 369598 | 18439.6 |
| signal peptide peptidase sppa | D7004_01620 | Not Available | Positive | 369651 - 371417 | 64992.3 |
| dna polymerase/3'-5' exonuclease polx | D7004_01625 | Not Available | Positive | 371595 - 373271 | 63053.9 |
| duf4254 domain-containing protein | D7004_01630 | Not Available | Positive | 373618 - 374220 | 23445.9 |
| lipopolysaccharide heptosyltransferase family protein | D7004_01635 | Not Available | Positive | 374247 - 375275 | 38358.7 |
| histidine phosphatase family protein | D7004_01640 | Not Available | Positive | 375268 - 375765 | 18507.9 |
| duf4290 domain-containing protein | D7004_01645 | Not Available | Positive | 376704 - 377390 | 26594.4 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | D7004_01650 | Not Available | Positive | 377561 - 378886 | 48140.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

