Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 3932527 - 3932598 | Not Available |
| methionine--trna ligase | D7004_16660 | Not Available | Negative | 3932732 - 3934837 | 79650.9 |
| ld-carboxypeptidase | D7004_16665 | Not Available | Positive | 3934876 - 3935775 | 33493.5 |
| doxx family protein | D7004_16670 | Not Available | Positive | 3935777 - 3936184 | 14346.1 |
| ragb/susd family nutrient uptake outer membrane protein | D7004_16675 | Not Available | Negative | 3936250 - 3937758 | 54758.6 |
| susc/raga family tonb-linked outer membrane protein | D7004_16680 | Not Available | Negative | 3937770 - 3940973 | 115818.0 |
| ragb/susd family nutrient uptake outer membrane protein | D7004_16685 | Not Available | Negative | 3941408 - 3942982 | 56033.0 |
| tonb-dependent receptor | D7004_16690 | Not Available | Negative | 3943063 - 3946167 | 111934.0 |
| hypothetical protein | D7004_16695 | Not Available | Negative | 3946597 - 3947265 | 25111.2 |
| ragb/susd family nutrient uptake outer membrane protein | D7004_16700 | Not Available | Negative | 3947334 - 3948743 | 51919.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

