Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | D7004_16505 | Not Available | Positive | 3902299 - 3902973 | 25776.3 |
| 6,7-dimethyl-8-ribityllumazine synthase | D7004_16510 | Not Available | Positive | 3903036 - 3903527 | 17234.6 |
| bacillithiol system redox-active protein ytxj | D7004_16515 | Not Available | Positive | 3903790 - 3904122 | 12382.8 |
| malate:quinone oxidoreductase | D7004_16520 | Not Available | Negative | 3904368 - 3905876 | 55772.1 |
| short-chain dehydrogenase | D7004_16525 | Not Available | Positive | 3906356 - 3907654 | 49955.0 |
| lipoyl synthase | D7004_16530 | Not Available | Positive | 3907888 - 3908781 | 33418.6 |
| sigma-70 family rna polymerase sigma factor | D7004_16535 | Not Available | Positive | 3908883 - 3909434 | 20925.4 |
| anti-sigma factor | D7004_16540 | Not Available | Positive | 3909437 - 3910291 | 31112.3 |
| aim24 family protein | D7004_16545 | Not Available | Negative | 3910459 - 3911160 | 25480.8 |
| nad(p)h-hydrate dehydratase | D7004_16550 | Not Available | Negative | 3911171 - 3912643 | 53651.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

