Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system higb family toxin | D7004_16455 | Not Available | Negative | 3888566 - 3888877 | 12025.6 |
| discoidin domain-containing protein | D7004_16460 | Not Available | Negative | 3888992 - 3890020 | 37645.5 |
| duf5077 domain-containing protein | D7004_16465 | Not Available | Negative | 3890032 - 3891426 | 50473.8 |
| ragb/susd family nutrient uptake outer membrane protein | D7004_16470 | Not Available | Negative | 3891356 - 3892858 | 55061.3 |
| tonb-dependent receptor | D7004_16475 | Not Available | Negative | 3892871 - 3895894 | 109612.0 |
| duf2132 domain-containing protein | D7004_16480 | Not Available | Negative | 3896638 - 3896859 | 8669.66 |
| m1 family peptidase | D7004_16485 | Not Available | Negative | 3896966 - 3898954 | 74080.6 |
| hypothetical protein | D7004_16490 | Not Available | Negative | 3899113 - 3899856 | 27847.9 |
| spx/mgsr family rna polymerase-binding regulatory protein | D7004_16495 | Not Available | Negative | 3899923 - 3900270 | 13323.0 |
| sensor histidine kinase | D7004_16500 | Not Available | Positive | 3900463 - 3901968 | 58028.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

