Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase small subunit | D7004_15895 | Not Available | Positive | 3781846 - 3782484 | 24557.4 |
| dinb family protein | D7004_15900 | Not Available | Positive | 3782607 - 3783071 | 17549.1 |
| ketol-acid reductoisomerase | D7004_15905 | Not Available | Positive | 3783311 - 3784792 | 54187.2 |
| 3-isopropylmalate dehydratase large subunit | D7004_15910 | Not Available | Positive | 3784849 - 3786261 | 51060.2 |
| sam-dependent methyltransferase | D7004_15920 | Not Available | Positive | 3786847 - 3787608 | 28173.2 |
| 3-isopropylmalate dehydratase small subunit | D7004_15925 | Not Available | Positive | 3787674 - 3788255 | 21654.5 |
| atp-binding cassette domain-containing protein | D7004_15930 | Not Available | Positive | 3788413 - 3789921 | 56709.6 |
| 3-isopropylmalate dehydrogenase | D7004_15935 | Not Available | Positive | 3789962 - 3791062 | 40653.9 |
| 2-isopropylmalate synthase | D7004_15940 | Not Available | Positive | 3791062 - 3792567 | 55003.6 |
| threonine dehydratase | D7004_15945 | Not Available | Positive | 3792888 - 3794159 | 46628.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

