Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | D7004_15785 | Not Available | Positive | 3756174 - 3756743 | 22010.7 |
| duf4974 domain-containing protein | D7004_15790 | Not Available | Positive | 3756852 - 3757991 | 42229.1 |
| susc/raga family tonb-linked outer membrane protein | D7004_15795 | Not Available | Positive | 3758195 - 3761524 | 120648.0 |
| ragb/susd family nutrient uptake outer membrane protein | D7004_15800 | Not Available | Positive | 3761531 - 3762928 | 50825.5 |
| ahpc/tsa family protein | D7004_15805 | Not Available | Positive | 3762935 - 3764131 | 45211.5 |
| ahpc/tsa family protein | D7004_15810 | Not Available | Positive | 3764151 - 3765293 | 42107.1 |
| hd domain-containing protein | D7004_15815 | Not Available | Negative | 3765644 - 3766480 | 31845.9 |
| hypothetical protein | D7004_15820 | Not Available | Positive | 3767024 - 3767302 | 10500.9 |
| hypothetical protein | D7004_15825 | Not Available | Negative | 3767838 - 3768137 | 11551.0 |
| hypothetical protein | D7004_15830 | Not Available | Positive | 3768878 - 3769195 | 12289.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

